Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 FAM90A2P-201ENST00000511144 1395 ntBASIC15.42■□□□□ 0.06
DENND4AQ7Z401 FAM90A25P-201ENST00000528404 1395 ntBASIC15.42■□□□□ 0.06
DENND4AQ7Z401 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 AC012441.2-201ENST00000444843 739 ntBASIC15.42■□□□□ 0.06
DENND4AQ7Z401 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 PHBP15-201ENST00000574228 665 ntBASIC15.42■□□□□ 0.06
DENND4AQ7Z401 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.42■□□□□ 0.06
DENND4AQ7Z401 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 AL512430.1-201ENST00000392575 860 ntBASIC15.41■□□□□ 0.06
DENND4AQ7Z401 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 AC097065.1-201ENST00000425737 517 ntBASIC15.41■□□□□ 0.06
DENND4AQ7Z401 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 RN7SL81P-201ENST00000493781 261 ntBASIC15.41■□□□□ 0.06
DENND4AQ7Z401 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 AC025262.2-201ENST00000623975 1056 ntBASIC15.41■□□□□ 0.06
DENND4AQ7Z401 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 AC090616.6-203ENST00000579186 1945 ntBASIC15.41■□□□□ 0.06
DENND4AQ7Z401 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
DENND4AQ7Z401 AC015909.3-201ENST00000572855 1794 ntBASIC15.41■□□□□ 0.06
DENND4AQ7Z401 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
DENND4AQ7Z401 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.4■□□□□ 0.06
DENND4AQ7Z401 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.4■□□□□ 0.06
DENND4AQ7Z401 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.4■□□□□ 0.06
DENND4AQ7Z401 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DENND4AQ7Z401 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
DENND4AQ7Z401 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms