Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC131212.3-201ENST00000624087 4219 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 BTBD7P1-201ENST00000447253 1453 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC023908.3-201ENST00000564211 3047 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
SCXQ7RTU7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
SCXQ7RTU7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.27□□□□□ -0.76
SCXQ7RTU7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.27□□□□□ -0.76
SCXQ7RTU7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
SCXQ7RTU7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 AC006538.1-201ENST00000567905 1585 ntBASIC10.27□□□□□ -0.76
SCXQ7RTU7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SCXQ7RTU7 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 HLA-J-202ENST00000469281 1241 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 CR383656.12-201ENST00000549567 513 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 AL512361.1-201ENST00000554200 418 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 AC010336.2-201ENST00000564226 506 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 AC006058.4-201ENST00000624016 1670 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 PCGF3-213ENST00000620529 1899 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 AC117489.1-201ENST00000625169 3217 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC10.27□□□□□ -0.77
SCXQ7RTU7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.27□□□□□ -0.77
SCXQ7RTU7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SCXQ7RTU7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.26□□□□□ -0.77
SCXQ7RTU7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms