Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR940-201ENST00000401276 94 ntBASIC13.96□□□□□ -0.17
SHFQ7M4L6 FAM8A3P-201ENST00000427218 844 ntBASIC13.96□□□□□ -0.17
SHFQ7M4L6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.96□□□□□ -0.17
SHFQ7M4L6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 AC018529.2-202ENST00000611482 3087 ntBASIC13.96□□□□□ -0.18
SHFQ7M4L6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 AP000845.1-201ENST00000581677 2131 ntBASIC13.96□□□□□ -0.18
SHFQ7M4L6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.96□□□□□ -0.18
SHFQ7M4L6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHFQ7M4L6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 AC136604.1-201ENST00000418535 575 ntBASIC13.95□□□□□ -0.18
SHFQ7M4L6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 HTR5BP-201ENST00000430851 1154 ntBASIC13.95□□□□□ -0.18
SHFQ7M4L6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 AC069335.1-201ENST00000489972 472 ntBASIC13.95□□□□□ -0.18
SHFQ7M4L6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 AC006504.5-208ENST00000588784 2401 ntBASIC13.95□□□□□ -0.18
SHFQ7M4L6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHFQ7M4L6 AC027601.5-201ENST00000624065 2482 ntBASIC13.95□□□□□ -0.18
SHFQ7M4L6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SHFQ7M4L6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.94□□□□□ -0.18
SHFQ7M4L6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 RPL5P21-201ENST00000404620 815 ntBASIC13.94□□□□□ -0.18
SHFQ7M4L6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 AL121894.2-201ENST00000602977 491 ntBASIC13.94□□□□□ -0.18
SHFQ7M4L6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.94□□□□□ -0.18
SHFQ7M4L6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms