Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AC015656.1-201ENST00000624209 3578 ntBASIC15.74■□□□□ 0.11
CASC4Q6P4E1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 RPL37AP1-201ENST00000412502 279 ntBASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AC074338.1-201ENST00000416825 156 ntBASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AP006288.1-201ENST00000446065 395 ntBASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AC004967.1-201ENST00000453589 447 ntBASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AL512356.2-201ENST00000546955 174 ntBASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AC027612.4-201ENST00000605371 583 ntBASIC15.74■□□□□ 0.11
CASC4Q6P4E1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 AC138969.2-201ENST00000532739 9932 ntBASIC15.73■□□□□ 0.11
CASC4Q6P4E1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 KRT18P64-201ENST00000434946 1219 ntBASIC15.73■□□□□ 0.11
CASC4Q6P4E1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.73■□□□□ 0.11
CASC4Q6P4E1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CASC4Q6P4E1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms