Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 ACTG1P14-201ENST00000446382 1122 ntBASIC14.62□□□□□ -0.07
CHRNB3Q05901 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 AL139010.1-201ENST00000454878 894 ntBASIC14.62□□□□□ -0.07
CHRNB3Q05901 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 RNA5SP410-201ENST00000516285 106 ntBASIC14.62□□□□□ -0.07
CHRNB3Q05901 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 KRT19P2-202ENST00000557173 1012 ntBASIC14.62□□□□□ -0.07
CHRNB3Q05901 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 AL138918.1-201ENST00000568306 659 ntBASIC14.62□□□□□ -0.07
CHRNB3Q05901 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 CYP4F24P-201ENST00000586049 1580 ntBASIC14.62□□□□□ -0.07
CHRNB3Q05901 AC097359.3-201ENST00000603982 1210 ntBASIC14.62□□□□□ -0.07
CHRNB3Q05901 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNB3Q05901 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB3Q05901 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 AC025580.3-201ENST00000617932 1424 ntBASIC14.61□□□□□ -0.07
CHRNB3Q05901 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 EEF1DP4-201ENST00000446006 880 ntBASIC14.61□□□□□ -0.07
CHRNB3Q05901 AP006288.1-201ENST00000446065 395 ntBASIC14.61□□□□□ -0.07
CHRNB3Q05901 DNAJB3-202ENST00000449667 1266 ntBASIC14.61□□□□□ -0.07
CHRNB3Q05901 CEND1P1-201ENST00000451006 455 ntBASIC14.61□□□□□ -0.07
CHRNB3Q05901 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNB3Q05901 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNB3Q05901 HNRNPUP1-201ENST00000554987 333 ntBASIC14.61□□□□□ -0.07
CHRNB3Q05901 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms