Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 PEG13-201ENST00000631594 5667 ntBASIC11.85□□□□□ -0.51
HIST1H1AQ02539 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 KRT8P44-201ENST00000441609 1350 ntBASIC11.85□□□□□ -0.51
HIST1H1AQ02539 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AL645939.2-201ENST00000427340 991 ntBASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AC022145.2-201ENST00000598203 171 ntBASIC11.85□□□□□ -0.51
HIST1H1AQ02539 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 AC117489.1-201ENST00000625169 3217 ntBASIC11.85□□□□□ -0.51
HIST1H1AQ02539 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.85□□□□□ -0.51
HIST1H1AQ02539 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MROH4P-201ENST00000431302 1578 ntBASIC11.84□□□□□ -0.51
HIST1H1AQ02539 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms