Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 PTENP1-202ENST00000532280 3996 ntBASIC13.55□□□□□ -0.24
SEC61A1P61619 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 AL353705.2-201ENST00000428243 662 ntBASIC13.55□□□□□ -0.24
SEC61A1P61619 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 AC245100.5-201ENST00000452108 331 ntBASIC13.55□□□□□ -0.24
SEC61A1P61619 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.55□□□□□ -0.24
SEC61A1P61619 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.55□□□□□ -0.24
SEC61A1P61619 BANF1P1-201ENST00000553684 263 ntBASIC13.55□□□□□ -0.24
SEC61A1P61619 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.55□□□□□ -0.24
SEC61A1P61619 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 AC092364.2-202ENST00000597012 1073 ntBASIC13.55□□□□□ -0.24
SEC61A1P61619 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 LINC02084-201ENST00000606069 1096 ntBASIC13.55□□□□□ -0.24
SEC61A1P61619 AL158211.3-201ENST00000607385 239 ntBASIC13.55□□□□□ -0.24
SEC61A1P61619 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SEC61A1P61619 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.55□□□□□ -0.24
SEC61A1P61619 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SEC61A1P61619 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SEC61A1P61619 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.54□□□□□ -0.24
SEC61A1P61619 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 BASP1P1-201ENST00000430708 665 ntBASIC13.54□□□□□ -0.24
SEC61A1P61619 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.54□□□□□ -0.24
SEC61A1P61619 MTND6P24-201ENST00000440466 518 ntBASIC13.54□□□□□ -0.24
SEC61A1P61619 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 UGT1A2P-201ENST00000454886 866 ntBASIC13.54□□□□□ -0.24
SEC61A1P61619 AC027369.6-201ENST00000525520 931 ntBASIC13.54□□□□□ -0.24
SEC61A1P61619 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.54□□□□□ -0.24
SEC61A1P61619 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 BEND3P1-201ENST00000421591 1944 ntBASIC13.54□□□□□ -0.24
SEC61A1P61619 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.54□□□□□ -0.24
SEC61A1P61619 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.54□□□□□ -0.24
SEC61A1P61619 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 AC107918.4-201ENST00000641966 3141 ntBASIC13.54□□□□□ -0.24
SEC61A1P61619 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms