Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.25□□□□□ -0.29
AP3S2P59780 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.25□□□□□ -0.29
AP3S2P59780 AC107918.4-202ENST00000641623 219 ntBASIC13.25□□□□□ -0.29
AP3S2P59780 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.25□□□□□ -0.29
AP3S2P59780 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
AP3S2P59780 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 CICP20-201ENST00000443330 2801 ntBASIC13.24□□□□□ -0.29
AP3S2P59780 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 KRT18P27-201ENST00000427733 1299 ntBASIC13.24□□□□□ -0.29
AP3S2P59780 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.24□□□□□ -0.29
AP3S2P59780 AL513480.1-201ENST00000451731 511 ntBASIC13.24□□□□□ -0.29
AP3S2P59780 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 DUX4L26-201ENST00000489078 1255 ntBASIC13.24□□□□□ -0.29
AP3S2P59780 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 AL009183.1-201ENST00000603760 355 ntBASIC13.24□□□□□ -0.29
AP3S2P59780 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 AC089987.1-201ENST00000551654 2209 ntBASIC13.24□□□□□ -0.29
AP3S2P59780 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
AP3S2P59780 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S2P59780 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AP3S2P59780 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.23□□□□□ -0.29
AP3S2P59780 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
AP3S2P59780 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 KRT8P37-201ENST00000451609 1420 ntBASIC13.23□□□□□ -0.29
AP3S2P59780 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
AP3S2P59780 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.23□□□□□ -0.29
AP3S2P59780 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
AP3S2P59780 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.23□□□□□ -0.29
AP3S2P59780 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.23□□□□□ -0.29
AP3S2P59780 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
AP3S2P59780 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.23□□□□□ -0.29
AP3S2P59780 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.23□□□□□ -0.29
AP3S2P59780 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.23□□□□□ -0.29
AP3S2P59780 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
AP3S2P59780 AP000845.1-201ENST00000581677 2131 ntBASIC13.23□□□□□ -0.29
AP3S2P59780 AC025062.2-201ENST00000605477 670 ntBASIC13.23□□□□□ -0.29
AP3S2P59780 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.23□□□□□ -0.29
AP3S2P59780 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms