Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.08□□□□□ -0.48
FAM3BP58499 SPDYE21P-201ENST00000413323 827 ntBASIC12.08□□□□□ -0.48
FAM3BP58499 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 HNRNPDP1-201ENST00000439535 754 ntBASIC12.08□□□□□ -0.48
FAM3BP58499 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.08□□□□□ -0.48
FAM3BP58499 IGHV3-22-201ENST00000520721 359 ntBASIC12.08□□□□□ -0.48
FAM3BP58499 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.08□□□□□ -0.48
FAM3BP58499 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.08□□□□□ -0.48
FAM3BP58499 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.08□□□□□ -0.48
FAM3BP58499 AC006538.3-201ENST00000612495 578 ntBASIC12.08□□□□□ -0.48
FAM3BP58499 AC005593.1-201ENST00000624894 515 ntBASIC12.08□□□□□ -0.48
FAM3BP58499 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.08□□□□□ -0.48
FAM3BP58499 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 AC118758.2-201ENST00000614242 2813 ntBASIC12.08□□□□□ -0.48
FAM3BP58499 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
FAM3BP58499 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.08□□□□□ -0.48
FAM3BP58499 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM3BP58499 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
FAM3BP58499 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM3BP58499 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
FAM3BP58499 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.07□□□□□ -0.48
FAM3BP58499 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM3BP58499 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
FAM3BP58499 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.07□□□□□ -0.48
FAM3BP58499 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM3BP58499 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM3BP58499 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.07□□□□□ -0.48
FAM3BP58499 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.07□□□□□ -0.48
FAM3BP58499 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.07□□□□□ -0.48
FAM3BP58499 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM3BP58499 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM3BP58499 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM3BP58499 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
FAM3BP58499 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM3BP58499 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
FAM3BP58499 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM3BP58499 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM3BP58499 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM3BP58499 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
FAM3BP58499 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
FAM3BP58499 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
FAM3BP58499 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM3BP58499 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM3BP58499 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM3BP58499 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
FAM3BP58499 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms