Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CLDN2P57739 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN2P57739 HOMER2P2-201ENST00000451621 847 ntBASIC15.11■□□□□ 0.01
CLDN2P57739 Z93015.1-201ENST00000451718 390 ntBASIC15.11■□□□□ 0.01
CLDN2P57739 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN2P57739 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN2P57739 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN2P57739 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 REXO1L5P-201ENST00000622260 2098 ntBASIC15.11■□□□□ 0.01
CLDN2P57739 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CLDN2P57739 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.11■□□□□ 0.01
CLDN2P57739 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 AC090616.6-203ENST00000579186 1945 ntBASIC15.11■□□□□ 0.01
CLDN2P57739 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN2P57739 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CLDN2P57739 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN2P57739 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.1■□□□□ 0.01
CLDN2P57739 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 RPL5P21-201ENST00000404620 815 ntBASIC15.1■□□□□ 0.01
CLDN2P57739 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN2P57739 CD8B2-202ENST00000417670 633 ntBASIC15.1■□□□□ 0.01
CLDN2P57739 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN2P57739 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN2P57739 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.1■□□□□ 0.01
CLDN2P57739 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN2P57739 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 AP006547.1-201ENST00000563435 692 ntBASIC15.1■□□□□ 0.01
CLDN2P57739 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 AL645728.2-202ENST00000641679 227 ntBASIC15.1■□□□□ 0.01
CLDN2P57739 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN2P57739 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN2P57739 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN2P57739 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN2P57739 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN2P57739 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN2P57739 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN2P57739 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN2P57739 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN2P57739 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN2P57739 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN2P57739 AL359258.3-201ENST00000622910 2331 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms