Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MYCLP2-201ENST00000449268 967 ntBASIC15.52■□□□□ 0.08
WNT3AP56704 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.52■□□□□ 0.08
WNT3AP56704 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.52■□□□□ 0.08
WNT3AP56704 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.52■□□□□ 0.08
WNT3AP56704 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.52■□□□□ 0.08
WNT3AP56704 AC093813.1-201ENST00000605066 256 ntBASIC15.52■□□□□ 0.08
WNT3AP56704 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.52■□□□□ 0.08
WNT3AP56704 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.52■□□□□ 0.08
WNT3AP56704 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
WNT3AP56704 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 PKD1P5-201ENST00000532415 10291 ntBASIC15.52■□□□□ 0.07
WNT3AP56704 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.52■□□□□ 0.07
WNT3AP56704 AJ011931.1-201ENST00000618749 2492 ntBASIC15.52■□□□□ 0.07
WNT3AP56704 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
WNT3AP56704 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 LINC02228-204ENST00000642115 2962 ntBASIC15.51■□□□□ 0.07
WNT3AP56704 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
WNT3AP56704 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.51■□□□□ 0.07
WNT3AP56704 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.51■□□□□ 0.07
WNT3AP56704 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 PCDHA3-202ENST00000532566 4594 ntBASIC15.51■□□□□ 0.07
WNT3AP56704 AC093525.8-201ENST00000624099 1342 ntBASIC15.51■□□□□ 0.07
WNT3AP56704 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 AL442647.2-201ENST00000429864 857 ntBASIC15.51■□□□□ 0.07
WNT3AP56704 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.51■□□□□ 0.07
WNT3AP56704 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.51■□□□□ 0.07
WNT3AP56704 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.51■□□□□ 0.07
WNT3AP56704 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.51■□□□□ 0.07
WNT3AP56704 AC007431.3-201ENST00000623221 587 ntBASIC15.51■□□□□ 0.07
WNT3AP56704 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.51■□□□□ 0.07
WNT3AP56704 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
WNT3AP56704 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.51■□□□□ 0.07
WNT3AP56704 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
WNT3AP56704 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 AL360270.3-201ENST00000609118 1348 ntBASIC15.5■□□□□ 0.07
WNT3AP56704 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.5■□□□□ 0.07
WNT3AP56704 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.5■□□□□ 0.07
WNT3AP56704 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
WNT3AP56704 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
WNT3AP56704 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.5■□□□□ 0.07
WNT3AP56704 PIN1P1-201ENST00000412108 996 ntBASIC15.5■□□□□ 0.07
WNT3AP56704 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.5■□□□□ 0.07
WNT3AP56704 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.5■□□□□ 0.07
WNT3AP56704 TERF1P3-201ENST00000505638 1227 ntBASIC15.5■□□□□ 0.07
WNT3AP56704 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.5■□□□□ 0.07
WNT3AP56704 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.5■□□□□ 0.07
WNT3AP56704 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms