Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL138828.2-201ENST00000615812 383 ntBASIC15.08■□□□□ 0
CDH13P55290 TEX28P2-201ENST00000617764 1221 ntBASIC15.08■□□□□ 0
CDH13P55290 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.08■□□□□ 0
CDH13P55290 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH13P55290 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.07■□□□□ 0
CDH13P55290 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
CDH13P55290 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDH13P55290 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CDH13P55290 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH13P55290 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 AL139400.1-201ENST00000366220 510 ntBASIC15.07■□□□□ 0
CDH13P55290 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 FAM8A3P-201ENST00000427218 844 ntBASIC15.07■□□□□ 0
CDH13P55290 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 HLA-V-204ENST00000476601 1289 ntBASIC15.07■□□□□ 0
CDH13P55290 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.07■□□□□ 0
CDH13P55290 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 AL109936.8-201ENST00000641772 604 ntBASIC15.07■□□□□ 0
CDH13P55290 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDH13P55290 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CDH13P55290 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.07■□□□□ 0
CDH13P55290 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CDH13P55290 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDH13P55290 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH13P55290 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.07■□□□□ 0
CDH13P55290 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.07■□□□□ 0
CDH13P55290 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDH13P55290 AL121723.1-201ENST00000445194 1519 ntBASIC15.07■□□□□ 0
CDH13P55290 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CDH13P55290 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.06■□□□□ 0
CDH13P55290 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 AC018529.2-202ENST00000611482 3087 ntBASIC15.06■□□□□ 0
CDH13P55290 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.06■□□□□ 0
CDH13P55290 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.06■□□□□ 0
CDH13P55290 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH13P55290 REXO1L4P-201ENST00000605109 1937 ntBASIC15.06■□□□□ 0
CDH13P55290 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH13P55290 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH13P55290 AC004967.1-201ENST00000453589 447 ntBASIC15.06■□□□□ 0
CDH13P55290 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.06■□□□□ 0
CDH13P55290 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.06■□□□□ 0
CDH13P55290 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.06■□□□□ 0
CDH13P55290 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH13P55290 AC010336.2-201ENST00000564226 506 ntBASIC15.06■□□□□ 0
CDH13P55290 AC051619.7-201ENST00000568314 623 ntBASIC15.06■□□□□ 0
CDH13P55290 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
CDH13P55290 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.06■□□□□ 0
CDH13P55290 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.06■□□□□ 0
CDH13P55290 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.06■□□□□ 0
CDH13P55290 Z92544.3-201ENST00000624747 417 ntBASIC15.06■□□□□ 0
CDH13P55290 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.06■□□□□ 0
CDH13P55290 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH13P55290 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CDH13P55290 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.06■□□□□ 0
CDH13P55290 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.06■□□□□ 0
CDH13P55290 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.06■□□□□ 0
CDH13P55290 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH13P55290 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms