Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDH8P55286 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDH8P55286 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 KLF2P2-201ENST00000416807 1039 ntBASIC16.35■□□□□ 0.21
CDH8P55286 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 HLA-K-203ENST00000430151 1046 ntBASIC16.35■□□□□ 0.21
CDH8P55286 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH8P55286 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 AC022137.2-201ENST00000503482 481 ntBASIC16.35■□□□□ 0.21
CDH8P55286 AP001889.1-201ENST00000525414 633 ntBASIC16.35■□□□□ 0.21
CDH8P55286 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH8P55286 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 AC011270.2-201ENST00000624293 2550 ntBASIC16.35■□□□□ 0.21
CDH8P55286 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 AL360270.3-201ENST00000609118 1348 ntBASIC16.35■□□□□ 0.21
CDH8P55286 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDH8P55286 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 AC012508.2-201ENST00000567613 1472 ntBASIC16.35■□□□□ 0.21
CDH8P55286 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CDH8P55286 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH8P55286 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDH8P55286 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH8P55286 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 GK-202ENST00000378941 458 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH8P55286 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 U91328.1-201ENST00000437528 223 ntBASIC16.34■□□□□ 0.21
CDH8P55286 AC012441.1-201ENST00000446669 685 ntBASIC16.34■□□□□ 0.21
CDH8P55286 BCRP2-202ENST00000447763 634 ntBASIC16.34■□□□□ 0.21
CDH8P55286 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 BCRP6-201ENST00000510112 632 ntBASIC16.34■□□□□ 0.21
CDH8P55286 BCRP7-201ENST00000511549 544 ntBASIC16.34■□□□□ 0.21
CDH8P55286 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH8P55286 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH8P55286 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH8P55286 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.34■□□□□ 0.21
CDH8P55286 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.34■□□□□ 0.21
CDH8P55286 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CDH8P55286 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH8P55286 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDH8P55286 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH8P55286 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH8P55286 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH8P55286 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDH8P55286 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms