Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1P52655 KRT18P38-201ENST00000449496 1282 ntBASIC15.13■□□□□ 0.01
GTF2A1P52655 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.13■□□□□ 0.01
GTF2A1P52655 YBX1P2-201ENST00000489612 999 ntBASIC15.13■□□□□ 0.01
GTF2A1P52655 AC122714.2-201ENST00000502787 707 ntBASIC15.13■□□□□ 0.01
GTF2A1P52655 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.13■□□□□ 0.01
GTF2A1P52655 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.13■□□□□ 0.01
GTF2A1P52655 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GTF2A1P52655 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GTF2A1P52655 AC022400.8-201ENST00000623453 3599 ntBASIC15.13■□□□□ 0.01
GTF2A1P52655 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.12■□□□□ 0.01
GTF2A1P52655 AC012531.1-201ENST00000562848 2680 ntBASIC15.12■□□□□ 0.01
GTF2A1P52655 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.12■□□□□ 0.01
GTF2A1P52655 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
GTF2A1P52655 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 AC103564.2-201ENST00000432853 1299 ntBASIC15.12■□□□□ 0.01
GTF2A1P52655 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.12■□□□□ 0.01
GTF2A1P52655 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.12■□□□□ 0.01
GTF2A1P52655 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.12■□□□□ 0.01
GTF2A1P52655 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GTF2A1P52655 TMEM191A-211ENST00000637163 1067 ntBASIC15.12■□□□□ 0.01
GTF2A1P52655 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC15.12■□□□□ 0.01
GTF2A1P52655 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.12■□□□□ 0.01
GTF2A1P52655 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.12■□□□□ 0.01
GTF2A1P52655 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.12■□□□□ 0.01
GTF2A1P52655 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
GTF2A1P52655 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.12■□□□□ 0.01
GTF2A1P52655 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GTF2A1P52655 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GTF2A1P52655 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GTF2A1P52655 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.11■□□□□ 0.01
GTF2A1P52655 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GTF2A1P52655 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.11■□□□□ 0.01
GTF2A1P52655 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
GTF2A1P52655 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 TMEM198B-204ENST00000484016 896 ntBASIC15.11■□□□□ 0.01
GTF2A1P52655 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.11■□□□□ 0.01
GTF2A1P52655 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.11■□□□□ 0.01
GTF2A1P52655 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.11■□□□□ 0.01
GTF2A1P52655 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
GTF2A1P52655 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 PAM-203ENST00000346918 3302 ntTSL 5 BASIC15.11■□□□□ 0.01
GTF2A1P52655 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GTF2A1P52655 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.11■□□□□ 0.01
GTF2A1P52655 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GTF2A1P52655 AC009336.1-201ENST00000608941 1553 ntBASIC15.11■□□□□ 0.01
GTF2A1P52655 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms