Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.91■□□□□ 0.3
GPC3P51654 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.91■□□□□ 0.3
GPC3P51654 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.91■□□□□ 0.3
GPC3P51654 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 AL109954.1-202ENST00000564051 2148 ntBASIC16.91■□□□□ 0.3
GPC3P51654 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
GPC3P51654 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.91■□□□□ 0.3
GPC3P51654 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.91■□□□□ 0.3
GPC3P51654 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GPC3P51654 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.91■□□□□ 0.3
GPC3P51654 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.91■□□□□ 0.3
GPC3P51654 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
GPC3P51654 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC3P51654 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC3P51654 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.9■□□□□ 0.3
GPC3P51654 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC3P51654 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
GPC3P51654 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC3P51654 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
GPC3P51654 AL158070.2-201ENST00000623713 1621 ntBASIC16.9■□□□□ 0.3
GPC3P51654 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GPC3P51654 AC006001.1-201ENST00000325130 474 ntBASIC16.9■□□□□ 0.3
GPC3P51654 FAM86MP-201ENST00000340703 885 ntBASIC16.9■□□□□ 0.3
GPC3P51654 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
GPC3P51654 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.9■□□□□ 0.3
GPC3P51654 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 AC078819.1-201ENST00000547454 765 ntBASIC16.9■□□□□ 0.3
GPC3P51654 AC012085.1-201ENST00000548270 765 ntBASIC16.9■□□□□ 0.3
GPC3P51654 AC132938.4-201ENST00000623835 848 ntBASIC16.9■□□□□ 0.3
GPC3P51654 AC008687.7-202ENST00000637404 953 ntBASIC16.9■□□□□ 0.3
GPC3P51654 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GPC3P51654 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC3P51654 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC3P51654 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.9■□□□□ 0.3
GPC3P51654 TUBB1P2-201ENST00000422712 1306 ntBASIC16.9■□□□□ 0.3
GPC3P51654 TUBB1P1-201ENST00000503144 1300 ntBASIC16.9■□□□□ 0.3
GPC3P51654 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
GPC3P51654 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GPC3P51654 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
GPC3P51654 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
GPC3P51654 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.89■□□□□ 0.3
GPC3P51654 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 HYMAI-201ENST00000635591 3347 ntBASIC16.89■□□□□ 0.29
GPC3P51654 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GPC3P51654 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.89■□□□□ 0.29
GPC3P51654 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 AL645937.2-201ENST00000396808 931 ntBASIC16.89■□□□□ 0.29
GPC3P51654 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 RPL5P21-201ENST00000404620 815 ntBASIC16.89■□□□□ 0.29
GPC3P51654 MIR1908-201ENST00000410394 80 ntBASIC16.89■□□□□ 0.29
GPC3P51654 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.89■□□□□ 0.29
GPC3P51654 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.89■□□□□ 0.29
GPC3P51654 SAMD11P1-201ENST00000571429 661 ntBASIC16.89■□□□□ 0.29
GPC3P51654 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.89■□□□□ 0.29
GPC3P51654 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GPC3P51654 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.89■□□□□ 0.29
GPC3P51654 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.89■□□□□ 0.29
GPC3P51654 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 AC006486.2-201ENST00000624246 2199 ntBASIC16.89■□□□□ 0.29
GPC3P51654 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC3P51654 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms