Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.84■□□□□ 0.29
CPT1AP50416 RN7SL774P-201ENST00000577467 290 ntBASIC16.84■□□□□ 0.29
CPT1AP50416 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.84■□□□□ 0.29
CPT1AP50416 AL358472.3-201ENST00000608147 415 ntBASIC16.84■□□□□ 0.29
CPT1AP50416 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.84■□□□□ 0.29
CPT1AP50416 AC002472.3-201ENST00000640124 621 ntBASIC16.84■□□□□ 0.29
CPT1AP50416 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CPT1AP50416 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.84■□□□□ 0.29
CPT1AP50416 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CPT1AP50416 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.84■□□□□ 0.29
CPT1AP50416 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.84■□□□□ 0.29
CPT1AP50416 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPT1AP50416 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CPT1AP50416 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPT1AP50416 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
CPT1AP50416 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CPT1AP50416 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPT1AP50416 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CPT1AP50416 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CPT1AP50416 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CPT1AP50416 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.83■□□□□ 0.28
CPT1AP50416 MST1L-201ENST00000442552 2185 ntBASIC16.83■□□□□ 0.28
CPT1AP50416 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.83■□□□□ 0.28
CPT1AP50416 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.83■□□□□ 0.28
CPT1AP50416 AC105250.1-201ENST00000509378 2057 ntBASIC16.83■□□□□ 0.28
CPT1AP50416 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.83■□□□□ 0.28
CPT1AP50416 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.83■□□□□ 0.28
CPT1AP50416 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CPT1AP50416 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.83■□□□□ 0.28
CPT1AP50416 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.83■□□□□ 0.28
CPT1AP50416 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CPT1AP50416 AC100827.2-201ENST00000563214 1194 ntBASIC16.83■□□□□ 0.28
CPT1AP50416 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.83■□□□□ 0.28
CPT1AP50416 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CPT1AP50416 AC026740.1-201ENST00000607068 791 ntBASIC16.83■□□□□ 0.28
CPT1AP50416 AL136295.7-201ENST00000619226 1200 ntBASIC16.83■□□□□ 0.28
CPT1AP50416 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.83■□□□□ 0.28
CPT1AP50416 AL162426.1-201ENST00000624141 743 ntBASIC16.83■□□□□ 0.28
CPT1AP50416 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CPT1AP50416 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.83■□□□□ 0.28
CPT1AP50416 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPT1AP50416 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CPT1AP50416 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CPT1AP50416 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 AC004899.1-201ENST00000424687 1714 ntBASIC16.82■□□□□ 0.28
CPT1AP50416 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.82■□□□□ 0.28
CPT1AP50416 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CPT1AP50416 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.82■□□□□ 0.28
CPT1AP50416 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.82■□□□□ 0.28
CPT1AP50416 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.82■□□□□ 0.28
CPT1AP50416 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.82■□□□□ 0.28
CPT1AP50416 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.82■□□□□ 0.28
CPT1AP50416 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.82■□□□□ 0.28
CPT1AP50416 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 AC138696.2-201ENST00000607376 223 ntBASIC16.82■□□□□ 0.28
CPT1AP50416 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.82■□□□□ 0.28
CPT1AP50416 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CPT1AP50416 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms