Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC1A6P48664 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 SPDYE17-201ENST00000412399 783 ntBASIC15.15■□□□□ 0.02
SLC1A6P48664 AL591424.1-201ENST00000442569 1213 ntBASIC15.15■□□□□ 0.02
SLC1A6P48664 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A6P48664 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC1A6P48664 AC069335.1-201ENST00000489972 472 ntBASIC15.15■□□□□ 0.02
SLC1A6P48664 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A6P48664 BANF1P1-201ENST00000553684 263 ntBASIC15.15■□□□□ 0.02
SLC1A6P48664 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A6P48664 AC015910.1-201ENST00000579400 975 ntBASIC15.15■□□□□ 0.02
SLC1A6P48664 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A6P48664 AC140113.2-201ENST00000604370 208 ntBASIC15.15■□□□□ 0.02
SLC1A6P48664 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A6P48664 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A6P48664 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC1A6P48664 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A6P48664 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A6P48664 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC1A6P48664 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A6P48664 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 MED15P5-201ENST00000423150 992 ntBASIC15.14■□□□□ 0.01
SLC1A6P48664 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 AL592309.1-201ENST00000443127 649 ntBASIC15.14■□□□□ 0.01
SLC1A6P48664 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A6P48664 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A6P48664 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SLC1A6P48664 AC138969.3-201ENST00000546612 1459 ntBASIC15.14■□□□□ 0.01
SLC1A6P48664 AC138932.2-201ENST00000548268 1459 ntBASIC15.14■□□□□ 0.01
SLC1A6P48664 AC126755.4-201ENST00000549796 1459 ntBASIC15.14■□□□□ 0.01
SLC1A6P48664 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A6P48664 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC1A6P48664 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A6P48664 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 BEND3P1-201ENST00000421591 1944 ntBASIC15.13■□□□□ 0.01
SLC1A6P48664 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A6P48664 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SLC1A6P48664 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC1A6P48664 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A6P48664 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC1A6P48664 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A6P48664 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC1A6P48664 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms