Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC6A12P48065 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
SLC6A12P48065 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC6A12P48065 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SLC6A12P48065 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SLC6A12P48065 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A12P48065 AC087499.6-201ENST00000411576 835 ntBASIC14.78□□□□□ -0.04
SLC6A12P48065 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A12P48065 AC002472.2-201ENST00000442739 958 ntBASIC14.78□□□□□ -0.04
SLC6A12P48065 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A12P48065 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A12P48065 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC6A12P48065 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SLC6A12P48065 SPDYE22P-201ENST00000582158 798 ntBASIC14.78□□□□□ -0.04
SLC6A12P48065 BX539320.1-201ENST00000623759 877 ntBASIC14.78□□□□□ -0.04
SLC6A12P48065 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC6A12P48065 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC6A12P48065 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC6A12P48065 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SLC6A12P48065 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SLC6A12P48065 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC6A12P48065 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC6A12P48065 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SLC6A12P48065 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC6A12P48065 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SLC6A12P48065 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC6A12P48065 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.77□□□□□ -0.04
SLC6A12P48065 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC6A12P48065 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A12P48065 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC6A12P48065 AC236430.1-201ENST00000402231 743 ntBASIC14.77□□□□□ -0.05
SLC6A12P48065 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC6A12P48065 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A12P48065 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A12P48065 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.77□□□□□ -0.05
SLC6A12P48065 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC6A12P48065 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC6A12P48065 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC6A12P48065 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC6A12P48065 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
SLC6A12P48065 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC6A12P48065 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLC6A12P48065 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC6A12P48065 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC6A12P48065 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SLC6A12P48065 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SLC6A12P48065 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A12P48065 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms