Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SLC1A3P43003 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLC1A3P43003 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A3P43003 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A3P43003 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A3P43003 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SLC1A3P43003 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC1A3P43003 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 AC005912.2-201ENST00000619492 2400 ntBASIC14.18□□□□□ -0.14
SLC1A3P43003 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.18□□□□□ -0.14
SLC1A3P43003 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC1A3P43003 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.18□□□□□ -0.14
SLC1A3P43003 AL512638.1-201ENST00000457493 794 ntBASIC14.18□□□□□ -0.14
SLC1A3P43003 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SLC1A3P43003 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLC1A3P43003 AC009407.1-201ENST00000568958 598 ntBASIC14.18□□□□□ -0.14
SLC1A3P43003 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.18□□□□□ -0.14
SLC1A3P43003 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 AL355385.1-201ENST00000606123 409 ntBASIC14.18□□□□□ -0.14
SLC1A3P43003 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLC1A3P43003 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLC1A3P43003 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 AJ011931.1-201ENST00000618749 2492 ntBASIC14.18□□□□□ -0.14
SLC1A3P43003 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A3P43003 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLC1A3P43003 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A3P43003 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 AC022144.1-201ENST00000602255 1580 ntBASIC14.17□□□□□ -0.14
SLC1A3P43003 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLC1A3P43003 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC1A3P43003 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 AL121723.1-201ENST00000445194 1519 ntBASIC14.17□□□□□ -0.14
SLC1A3P43003 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 BASP1P1-201ENST00000430708 665 ntBASIC14.17□□□□□ -0.14
SLC1A3P43003 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 AC004890.2-204ENST00000481968 304 ntBASIC14.17□□□□□ -0.14
SLC1A3P43003 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SLC1A3P43003 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLC1A3P43003 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms