Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PIK3CBP42338 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
PIK3CBP42338 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.78□□□□□ -0.04
PIK3CBP42338 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.78□□□□□ -0.04
PIK3CBP42338 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PIK3CBP42338 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PIK3CBP42338 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.78□□□□□ -0.04
PIK3CBP42338 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.78□□□□□ -0.04
PIK3CBP42338 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.78□□□□□ -0.04
PIK3CBP42338 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 INGX-202ENST00000489074 768 ntBASIC14.78□□□□□ -0.04
PIK3CBP42338 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.78□□□□□ -0.04
PIK3CBP42338 TPRX2P-201ENST00000535362 881 ntBASIC14.78□□□□□ -0.04
PIK3CBP42338 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.78□□□□□ -0.04
PIK3CBP42338 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.78□□□□□ -0.04
PIK3CBP42338 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.78□□□□□ -0.04
PIK3CBP42338 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.78□□□□□ -0.04
PIK3CBP42338 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.78□□□□□ -0.04
PIK3CBP42338 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PIK3CBP42338 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.78□□□□□ -0.04
PIK3CBP42338 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIK3CBP42338 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.77□□□□□ -0.04
PIK3CBP42338 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.77□□□□□ -0.04
PIK3CBP42338 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.77□□□□□ -0.04
PIK3CBP42338 MYO15B-237ENST00000642007 4893 ntBASIC14.77□□□□□ -0.04
PIK3CBP42338 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.77□□□□□ -0.04
PIK3CBP42338 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PIK3CBP42338 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIK3CBP42338 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.77□□□□□ -0.04
PIK3CBP42338 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.77□□□□□ -0.05
PIK3CBP42338 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.77□□□□□ -0.05
PIK3CBP42338 RN7SL399P-201ENST00000471648 279 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 FAM86LP-201ENST00000478302 853 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.77□□□□□ -0.05
PIK3CBP42338 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.77□□□□□ -0.05
PIK3CBP42338 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.77□□□□□ -0.05
PIK3CBP42338 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.77□□□□□ -0.05
PIK3CBP42338 AC023310.3-201ENST00000557027 670 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 AC100756.1-201ENST00000562736 682 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 AC138749.3-201ENST00000567691 622 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.77□□□□□ -0.05
PIK3CBP42338 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.77□□□□□ -0.05
PIK3CBP42338 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 AC116165.1-201ENST00000611806 668 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 AC009118.2-201ENST00000613275 655 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.77□□□□□ -0.05
PIK3CBP42338 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PIK3CBP42338 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
PIK3CBP42338 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PIK3CBP42338 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 CICP24-201ENST00000605464 2705 ntBASIC14.77□□□□□ -0.05
PIK3CBP42338 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.77□□□□□ -0.05
PIK3CBP42338 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.77□□□□□ -0.05
PIK3CBP42338 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIK3CBP42338 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PIK3CBP42338 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.76□□□□□ -0.05
PIK3CBP42338 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3CBP42338 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3CBP42338 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.76□□□□□ -0.05
PIK3CBP42338 REXO1L4P-201ENST00000605109 1937 ntBASIC14.76□□□□□ -0.05
PIK3CBP42338 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PIK3CBP42338 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3CBP42338 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PIK3CBP42338 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIK3CBP42338 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms