Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 AC063926.3-201ENST00000624734 5658 ntBASIC14.12□□□□□ -0.15
RFC3P40938 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RFC3P40938 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 AC093525.8-201ENST00000624099 1342 ntBASIC14.12□□□□□ -0.15
RFC3P40938 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RFC3P40938 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.12□□□□□ -0.15
RFC3P40938 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RFC3P40938 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.12□□□□□ -0.15
RFC3P40938 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RFC3P40938 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFC3P40938 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFC3P40938 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.11□□□□□ -0.15
RFC3P40938 AC005229.1-201ENST00000392885 409 ntBASIC14.11□□□□□ -0.15
RFC3P40938 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.11□□□□□ -0.15
RFC3P40938 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RFC3P40938 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.11□□□□□ -0.15
RFC3P40938 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 FTH1P14-201ENST00000482930 551 ntBASIC14.11□□□□□ -0.15
RFC3P40938 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.11□□□□□ -0.15
RFC3P40938 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.11□□□□□ -0.15
RFC3P40938 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.11□□□□□ -0.15
RFC3P40938 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.11□□□□□ -0.15
RFC3P40938 AC244669.2-201ENST00000612320 853 ntBASIC14.11□□□□□ -0.15
RFC3P40938 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 AL033527.4-201ENST00000641026 673 ntBASIC14.11□□□□□ -0.15
RFC3P40938 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RFC3P40938 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.11□□□□□ -0.15
RFC3P40938 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RFC3P40938 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFC3P40938 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.11□□□□□ -0.15
RFC3P40938 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 REXO1L6P-201ENST00000603433 1515 ntBASIC14.1□□□□□ -0.15
RFC3P40938 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RFC3P40938 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.1□□□□□ -0.15
RFC3P40938 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RFC3P40938 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RFC3P40938 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RFC3P40938 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.1□□□□□ -0.15
RFC3P40938 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.1□□□□□ -0.15
RFC3P40938 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.1□□□□□ -0.15
RFC3P40938 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.1□□□□□ -0.15
RFC3P40938 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RFC3P40938 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFC3P40938 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms