Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RFC4P35249 AL627231.1-201ENST00000394467 1125 ntBASIC19.04■□□□□ 0.64
RFC4P35249 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.04■□□□□ 0.64
RFC4P35249 RPSAP31-201ENST00000416648 895 ntBASIC19.04■□□□□ 0.64
RFC4P35249 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.04■□□□□ 0.64
RFC4P35249 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.04■□□□□ 0.64
RFC4P35249 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.04■□□□□ 0.64
RFC4P35249 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.04■□□□□ 0.64
RFC4P35249 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.04■□□□□ 0.64
RFC4P35249 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
RFC4P35249 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 AC087045.2-201ENST00000606279 1003 ntBASIC19.04■□□□□ 0.64
RFC4P35249 AC138696.2-201ENST00000607376 223 ntBASIC19.04■□□□□ 0.64
RFC4P35249 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.04■□□□□ 0.64
RFC4P35249 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC4P35249 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC4P35249 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.03■□□□□ 0.64
RFC4P35249 AC020910.5-201ENST00000623668 1865 ntBASIC19.03■□□□□ 0.64
RFC4P35249 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC4P35249 AC112504.1-201ENST00000623415 1841 ntBASIC19.03■□□□□ 0.64
RFC4P35249 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.03■□□□□ 0.64
RFC4P35249 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.03■□□□□ 0.64
RFC4P35249 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.03■□□□□ 0.64
RFC4P35249 AC012441.2-201ENST00000444843 739 ntBASIC19.03■□□□□ 0.64
RFC4P35249 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.03■□□□□ 0.64
RFC4P35249 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.03■□□□□ 0.64
RFC4P35249 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.03■□□□□ 0.64
RFC4P35249 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC4P35249 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.03■□□□□ 0.64
RFC4P35249 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.03■□□□□ 0.64
RFC4P35249 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 AC092171.5-201ENST00000608012 942 ntBASIC19.03■□□□□ 0.64
RFC4P35249 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFC4P35249 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 MST1L-201ENST00000442552 2185 ntBASIC19.03■□□□□ 0.64
RFC4P35249 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC4P35249 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC4P35249 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC4P35249 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC4P35249 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC4P35249 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RFC4P35249 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
RFC4P35249 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 AD000864.1-201ENST00000624076 2295 ntBASIC19.02■□□□□ 0.64
RFC4P35249 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RFC4P35249 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms