Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM3P06753 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TPM3P06753 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM3P06753 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM3P06753 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM3P06753 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM3P06753 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM3P06753 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM3P06753 FAAHP1-202ENST00000446499 1238 ntBASIC17.29■□□□□ 0.36
TPM3P06753 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.29■□□□□ 0.36
TPM3P06753 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TPM3P06753 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM3P06753 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.29■□□□□ 0.36
TPM3P06753 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM3P06753 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM3P06753 FOXO1B-201ENST00000504678 1527 ntBASIC17.29■□□□□ 0.36
TPM3P06753 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM3P06753 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM3P06753 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TPM3P06753 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM3P06753 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM3P06753 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM3P06753 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM3P06753 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TPM3P06753 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM3P06753 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.28■□□□□ 0.36
TPM3P06753 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM3P06753 TCAF1P1-201ENST00000414990 2232 ntBASIC17.28■□□□□ 0.36
TPM3P06753 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM3P06753 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 AC097359.2-201ENST00000604992 2389 ntBASIC17.28■□□□□ 0.36
TPM3P06753 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 AC079781.3-201ENST00000449110 356 ntBASIC17.28■□□□□ 0.36
TPM3P06753 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.28■□□□□ 0.36
TPM3P06753 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.28■□□□□ 0.36
TPM3P06753 KRT18P56-201ENST00000507275 550 ntBASIC17.28■□□□□ 0.36
TPM3P06753 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM3P06753 PDPK2P-202ENST00000562415 1191 ntBASIC17.28■□□□□ 0.36
TPM3P06753 AC018845.2-201ENST00000568326 409 ntBASIC17.28■□□□□ 0.36
TPM3P06753 AP001005.1-201ENST00000571755 1248 ntBASIC17.28■□□□□ 0.36
TPM3P06753 AP002472.1-201ENST00000577490 586 ntBASIC17.28■□□□□ 0.36
TPM3P06753 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 AC064836.3-201ENST00000607928 673 ntBASIC17.28■□□□□ 0.36
TPM3P06753 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TPM3P06753 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 AC011474.4-201ENST00000623523 2076 ntBASIC17.28■□□□□ 0.36
TPM3P06753 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TPM3P06753 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.28■□□□□ 0.36
TPM3P06753 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM3P06753 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM3P06753 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TPM3P06753 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms