Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.06□□□□□ -0.48
ZNF253O75346 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF253O75346 FAM86C2P-203ENST00000528684 1004 ntBASIC12.06□□□□□ -0.48
ZNF253O75346 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF253O75346 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF253O75346 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF253O75346 AC099522.2-201ENST00000607001 744 ntBASIC12.06□□□□□ -0.48
ZNF253O75346 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ZNF253O75346 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
ZNF253O75346 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF253O75346 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 CICP8-201ENST00000455800 2813 ntBASIC12.06□□□□□ -0.48
ZNF253O75346 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 CICP17-201ENST00000418553 2377 ntBASIC12.05□□□□□ -0.48
ZNF253O75346 KRT8P37-201ENST00000451609 1420 ntBASIC12.05□□□□□ -0.48
ZNF253O75346 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.05□□□□□ -0.48
ZNF253O75346 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ZNF253O75346 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 AL450487.1-201ENST00000426799 995 ntBASIC12.05□□□□□ -0.48
ZNF253O75346 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 AL139010.1-201ENST00000454878 894 ntBASIC12.05□□□□□ -0.48
ZNF253O75346 RN7SL589P-201ENST00000481268 310 ntBASIC12.05□□□□□ -0.48
ZNF253O75346 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ZNF253O75346 AC034105.1-201ENST00000563488 319 ntBASIC12.05□□□□□ -0.48
ZNF253O75346 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.05□□□□□ -0.48
ZNF253O75346 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
ZNF253O75346 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms