Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CACNA1FO60840 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.94■□□□□ 0.62
CACNA1FO60840 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 AL008638.5-201ENST00000623814 1298 ntBASIC18.94■□□□□ 0.62
CACNA1FO60840 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CACNA1FO60840 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CACNA1FO60840 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1FO60840 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1FO60840 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA1FO60840 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.93■□□□□ 0.62
CACNA1FO60840 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.93■□□□□ 0.62
CACNA1FO60840 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1FO60840 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1FO60840 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.93■□□□□ 0.62
CACNA1FO60840 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1FO60840 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1FO60840 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1FO60840 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CACNA1FO60840 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNA1FO60840 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNA1FO60840 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1FO60840 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA1FO60840 PFN1P12-201ENST00000455938 534 ntBASIC18.93■□□□□ 0.62
CACNA1FO60840 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNA1FO60840 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA1FO60840 AC005324.6-201ENST00000587972 613 ntBASIC18.93■□□□□ 0.62
CACNA1FO60840 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.93■□□□□ 0.62
CACNA1FO60840 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1FO60840 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CACNA1FO60840 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1FO60840 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA1FO60840 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.92■□□□□ 0.62
CACNA1FO60840 AC244107.1-201ENST00000442033 332 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 Z93015.1-201ENST00000451718 390 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 AC104306.2-201ENST00000451877 341 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.92■□□□□ 0.62
CACNA1FO60840 AC092658.1-201ENST00000505836 891 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.92■□□□□ 0.62
CACNA1FO60840 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA1FO60840 MIR4538-201ENST00000581377 78 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 AC244394.1-201ENST00000435000 1665 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA1FO60840 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 FGD5P1-202ENST00000614866 2498 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.92■□□□□ 0.62
CACNA1FO60840 AL591846.1-201ENST00000451736 433 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.92■□□□□ 0.62
CACNA1FO60840 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 AC023310.1-201ENST00000554836 735 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
CACNA1FO60840 AC244157.2-201ENST00000616239 1006 ntBASIC18.92■□□□□ 0.62
CACNA1FO60840 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1FO60840 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1FO60840 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.91■□□□□ 0.62
CACNA1FO60840 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1FO60840 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms