Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CUBNO60494 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CUBNO60494 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
CUBNO60494 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.03□□□□□ -0.48
CUBNO60494 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 LINC00634-202ENST00000505157 222 ntBASIC12.03□□□□□ -0.48
CUBNO60494 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 AL031713.1-201ENST00000564813 661 ntBASIC12.03□□□□□ -0.48
CUBNO60494 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 MME-218ENST00000625667 363 ntTSL 5 BASIC12.03□□□□□ -0.48
CUBNO60494 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 VDAC1P1-201ENST00000439229 848 ntBASIC12.03□□□□□ -0.48
CUBNO60494 BRI3P1-201ENST00000440440 378 ntBASIC12.03□□□□□ -0.48
CUBNO60494 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.03□□□□□ -0.48
CUBNO60494 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.03□□□□□ -0.48
CUBNO60494 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.03□□□□□ -0.48
CUBNO60494 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.03□□□□□ -0.48
CUBNO60494 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC12.03□□□□□ -0.48
CUBNO60494 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.03□□□□□ -0.48
CUBNO60494 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 FO393412.1-201ENST00000619841 382 ntBASIC12.03□□□□□ -0.48
CUBNO60494 SHC1P1-201ENST00000425230 1745 ntBASIC12.03□□□□□ -0.48
CUBNO60494 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CUBNO60494 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 AL137783.1-201ENST00000623494 1896 ntBASIC12.03□□□□□ -0.48
CUBNO60494 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 DDX39AP1-201ENST00000445147 1181 ntBASIC12.03□□□□□ -0.48
CUBNO60494 AC018463.1-201ENST00000456674 917 ntBASIC12.03□□□□□ -0.48
CUBNO60494 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CUBNO60494 ALG1L6P-201ENST00000515248 758 ntBASIC12.03□□□□□ -0.48
CUBNO60494 AC090857.1-201ENST00000527400 390 ntBASIC12.03□□□□□ -0.48
CUBNO60494 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CUBNO60494 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.03□□□□□ -0.48
CUBNO60494 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CUBNO60494 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.02□□□□□ -0.48
CUBNO60494 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CUBNO60494 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CUBNO60494 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CUBNO60494 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CUBNO60494 AC107464.3-201ENST00000609172 737 ntBASIC12.02□□□□□ -0.48
CUBNO60494 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.02□□□□□ -0.48
CUBNO60494 AL136295.7-201ENST00000619226 1200 ntBASIC12.02□□□□□ -0.48
CUBNO60494 AC138466.3-201ENST00000619983 221 ntBASIC12.02□□□□□ -0.48
CUBNO60494 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CUBNO60494 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CUBNO60494 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.02□□□□□ -0.49
CUBNO60494 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 AL627422.1-201ENST00000434104 580 ntBASIC12.02□□□□□ -0.49
CUBNO60494 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.02□□□□□ -0.49
CUBNO60494 AC090502.4-201ENST00000551714 1386 ntBASIC12.02□□□□□ -0.49
CUBNO60494 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.02□□□□□ -0.49
CUBNO60494 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
CUBNO60494 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms