Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC23.9■■□□□ 1.42
CHD1O14646 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CHD1O14646 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1O14646 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD1O14646 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1O14646 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1O14646 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD1O14646 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC23.9■■□□□ 1.42
CHD1O14646 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC23.9■■□□□ 1.42
CHD1O14646 OR8T1P-201ENST00000421347 918 ntBASIC23.9■■□□□ 1.42
CHD1O14646 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD1O14646 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC23.9■■□□□ 1.42
CHD1O14646 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD1O14646 GOLGA2P7-209ENST00000560408 745 ntBASIC23.9■■□□□ 1.42
CHD1O14646 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC23.9■■□□□ 1.42
CHD1O14646 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC23.89■■□□□ 1.42
CHD1O14646 AC013726.1-201ENST00000563747 2285 ntBASIC23.89■■□□□ 1.42
CHD1O14646 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
CHD1O14646 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC23.89■■□□□ 1.42
CHD1O14646 WASH7P-201ENST00000488147 1351 ntBASIC23.89■■□□□ 1.42
CHD1O14646 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHD1O14646 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1O14646 AL359258.3-201ENST00000622910 2331 ntBASIC23.89■■□□□ 1.41
CHD1O14646 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1O14646 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC23.89■■□□□ 1.41
CHD1O14646 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 AL512599.1-201ENST00000430724 685 ntBASIC23.89■■□□□ 1.41
CHD1O14646 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 COX5A-205ENST00000568517 582 ntTSL 3 BASIC23.89■■□□□ 1.41
CHD1O14646 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1O14646 API5-202ENST00000420461 2009 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1O14646 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC23.89■■□□□ 1.41
CHD1O14646 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CHD1O14646 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1O14646 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1O14646 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
CHD1O14646 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CHD1O14646 AC112504.1-201ENST00000623415 1841 ntBASIC23.88■■□□□ 1.41
CHD1O14646 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CHD1O14646 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC23.88■■□□□ 1.41
CHD1O14646 RPL14-203ENST00000416518 812 ntTSL 3 BASIC23.88■■□□□ 1.41
CHD1O14646 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC23.88■■□□□ 1.41
CHD1O14646 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1O14646 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC23.88■■□□□ 1.41
CHD1O14646 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1O14646 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1O14646 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.88■■□□□ 1.41
CHD1O14646 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC23.88■■□□□ 1.41
CHD1O14646 KRT8P28-201ENST00000433288 1390 ntBASIC23.88■■□□□ 1.41
CHD1O14646 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CHD1O14646 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC23.88■■□□□ 1.41
CHD1O14646 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1O14646 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CHD1O14646 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC23.87■■□□□ 1.41
CHD1O14646 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CHD1O14646 EEF1DP5-201ENST00000431410 772 ntBASIC23.87■■□□□ 1.41
CHD1O14646 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC23.87■■□□□ 1.41
CHD1O14646 RNLS-203ENST00000437752 525 ntTSL 2 BASIC23.87■■□□□ 1.41
CHD1O14646 SOD2-205ENST00000444946 917 ntTSL 2 BASIC23.87■■□□□ 1.41
CHD1O14646 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC23.87■■□□□ 1.41
CHD1O14646 AL035414.1-201ENST00000451327 857 ntBASIC23.87■■□□□ 1.41
CHD1O14646 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CHD1O14646 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC23.87■■□□□ 1.41
CHD1O14646 BCL2L12P1-201ENST00000508390 733 ntBASIC23.87■■□□□ 1.41
CHD1O14646 NAA40-205ENST00000539656 577 ntTSL 4 BASIC23.87■■□□□ 1.41
CHD1O14646 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 FBXO36P1-201ENST00000579006 471 ntBASIC23.87■■□□□ 1.41
CHD1O14646 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC23.87■■□□□ 1.41
CHD1O14646 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CHD1O14646 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
CHD1O14646 TEKT4P2-202ENST00000559466 1312 ntBASIC23.87■■□□□ 1.41
CHD1O14646 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
CHD1O14646 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
CHD1O14646 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
CHD1O14646 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms