Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.39■□□□□ 0.21
O00370 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
O00370 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.39■□□□□ 0.21
O00370 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.39■□□□□ 0.21
O00370 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.39■□□□□ 0.21
O00370 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.39■□□□□ 0.21
O00370 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
O00370 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.38■□□□□ 0.21
O00370 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
O00370 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.38■□□□□ 0.21
O00370 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
O00370 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.38■□□□□ 0.21
O00370 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
O00370 LINC01101-201ENST00000622953 1884 ntBASIC16.38■□□□□ 0.21
O00370 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.38■□□□□ 0.21
O00370 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
O00370 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.38■□□□□ 0.21
O00370 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.38■□□□□ 0.21
O00370 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.38■□□□□ 0.21
O00370 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.38■□□□□ 0.21
O00370 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.38■□□□□ 0.21
O00370 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
O00370 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 GRK6P1-201ENST00000400595 1711 ntBASIC16.38■□□□□ 0.21
O00370 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.38■□□□□ 0.21
O00370 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 AC026748.1-201ENST00000624349 3251 ntBASIC16.38■□□□□ 0.21
O00370 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.38■□□□□ 0.21
O00370 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 AC005089.1-201ENST00000619486 2241 ntBASIC16.38■□□□□ 0.21
O00370 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
O00370 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
O00370 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
O00370 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.37■□□□□ 0.21
O00370 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
O00370 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.37■□□□□ 0.21
O00370 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.37■□□□□ 0.21
O00370 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.37■□□□□ 0.21
O00370 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
O00370 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.37■□□□□ 0.21
O00370 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
O00370 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.37■□□□□ 0.21
O00370 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
O00370 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 DGCR5-201ENST00000399539 862 ntBASIC16.37■□□□□ 0.21
O00370 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 AC134915.1-201ENST00000426461 574 ntBASIC16.37■□□□□ 0.21
O00370 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.37■□□□□ 0.21
O00370 AL359711.2-201ENST00000563105 872 ntBASIC16.37■□□□□ 0.21
O00370 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.37■□□□□ 0.21
O00370 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.37■□□□□ 0.21
O00370 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.37■□□□□ 0.21
O00370 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
O00370 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.37■□□□□ 0.21
O00370 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.37■□□□□ 0.21
O00370 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.37■□□□□ 0.21
O00370 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.37■□□□□ 0.21
O00370 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.37■□□□□ 0.21
O00370 NFIC-211ENST00000641145 8399 ntBASIC16.37■□□□□ 0.21
O00370 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
O00370 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
O00370 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
O00370 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms