Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16■□□□□ 0.15
CCDC188H7C350 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16■□□□□ 0.15
CCDC188H7C350 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 MED15P5-201ENST00000423150 992 ntBASIC16■□□□□ 0.15
CCDC188H7C350 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
CCDC188H7C350 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16■□□□□ 0.15
CCDC188H7C350 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16■□□□□ 0.15
CCDC188H7C350 AC140113.2-201ENST00000604370 208 ntBASIC16■□□□□ 0.15
CCDC188H7C350 AC018529.1-201ENST00000613063 361 ntBASIC16■□□□□ 0.15
CCDC188H7C350 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 AC055811.4-201ENST00000624039 1754 ntBASIC16■□□□□ 0.15
CCDC188H7C350 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC188H7C350 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16■□□□□ 0.15
CCDC188H7C350 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16■□□□□ 0.15
CCDC188H7C350 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC188H7C350 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC188H7C350 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 IL9RP2-201ENST00000423948 1312 ntBASIC15.99■□□□□ 0.15
CCDC188H7C350 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC188H7C350 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC188H7C350 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC188H7C350 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 AL133215.2-201ENST00000609242 977 ntBASIC15.99■□□□□ 0.15
CCDC188H7C350 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC188H7C350 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC188H7C350 LILRP1-201ENST00000444199 1370 ntBASIC15.99■□□□□ 0.15
CCDC188H7C350 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC188H7C350 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms