Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 AC020658.6-201ENST00000623564 1870 ntBASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA3F8WFD2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 AC005229.1-201ENST00000392885 409 ntBASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 BAATP1-201ENST00000412284 1225 ntBASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 AP001889.1-201ENST00000525414 633 ntBASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 AP001063.1-201ENST00000568332 529 ntBASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA3F8WFD2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AL133267.1-201ENST00000398220 340 ntBASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC093433.1-201ENST00000458048 571 ntBASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC005252.2-201ENST00000624630 1141 ntBASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AL033527.4-201ENST00000641026 673 ntBASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AC105250.1-201ENST00000509378 2057 ntBASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms