Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 AC138701.2-201ENST00000553634 226 ntBASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 ABHD17AP9-201ENST00000561925 548 ntBASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 HERC2P11-201ENST00000562845 725 ntBASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 AC100756.2-201ENST00000569537 736 ntBASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 AC133540.1-201ENST00000620845 1019 ntBASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 AC021305.1-201ENST00000520656 1514 ntBASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 AC006449.6-201ENST00000612330 2296 ntBASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 MIR566-201ENST00000385187 94 ntBASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 GUSBP10-201ENST00000417412 665 ntBASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 AC004686.1-201ENST00000605113 538 ntBASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 CYP4F23P-201ENST00000593402 1579 ntBASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM88BA6NKF7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 ALOX12P2-203ENST00000570921 1945 ntBASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 RNA5SP359-201ENST00000364838 113 ntBASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 RN7SKP230-201ENST00000365642 335 ntBASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM88BA6NKF7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM88BA6NKF7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms