Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 KRT18P32-201ENST00000424695 1287 ntBASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 PHKG1P2-201ENST00000457537 863 ntBASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 AL671883.3-201ENST00000603274 991 ntBASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC105339.1-204ENST00000636249 355 ntBASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF103-CHMP3A0A140T963 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 AL353705.2-201ENST00000428243 662 ntBASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 DNAJB3-201ENST00000446806 729 ntBASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC005829.1-201ENST00000570002 483 ntBASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 LINC01230-201ENST00000625222 3017 ntBASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF103-CHMP3A0A140T963 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms