Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 DGAT2L7P-201ENST00000602462 744 ntBASIC17.17■□□□□ 0.34
TRIM17Q9Y577 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 KRT8P21-201ENST00000430398 1491 ntBASIC17.17■□□□□ 0.34
TRIM17Q9Y577 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM17Q9Y577 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 MBLAC2-202ENST00000514906 1936 ntBASIC17.16■□□□□ 0.34
TRIM17Q9Y577 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 ALG1L6P-201ENST00000515248 758 ntBASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 AL162727.3-201ENST00000635661 2787 ntBASIC17.16■□□□□ 0.34
TRIM17Q9Y577 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM17Q9Y577 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 RN7SKP175-201ENST00000408472 289 ntBASIC17.15■□□□□ 0.34
TRIM17Q9Y577 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AC087392.5-201ENST00000612517 489 ntBASIC17.15■□□□□ 0.34
TRIM17Q9Y577 MIR6769A-201ENST00000617340 73 ntBASIC17.15■□□□□ 0.34
TRIM17Q9Y577 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AC092299.1-201ENST00000632679 757 ntBASIC17.15■□□□□ 0.34
TRIM17Q9Y577 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 AL008718.2-201ENST00000609206 1313 ntBASIC17.15■□□□□ 0.34
TRIM17Q9Y577 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM17Q9Y577 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
TRIM17Q9Y577 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms