Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 POM121L10P-201ENST00000436994 1285 ntBASIC20.79■□□□□ 0.92
NINLQ9Y2I6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 AC004898.1-201ENST00000451057 766 ntBASIC20.79■□□□□ 0.92
NINLQ9Y2I6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 AL137783.1-201ENST00000623494 1896 ntBASIC20.79■□□□□ 0.92
NINLQ9Y2I6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 AC104640.1-201ENST00000562617 2109 ntBASIC20.79■□□□□ 0.92
NINLQ9Y2I6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NINLQ9Y2I6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 C18orf15-201ENST00000623680 2534 ntBASIC20.78■□□□□ 0.92
NINLQ9Y2I6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 HIST2H2BB-201ENST00000449108 381 ntBASIC20.78■□□□□ 0.92
NINLQ9Y2I6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 AC128714.1-201ENST00000637035 887 ntBASIC20.78■□□□□ 0.92
NINLQ9Y2I6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NINLQ9Y2I6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 AL139384.1-201ENST00000612143 3047 ntBASIC20.77■□□□□ 0.92
NINLQ9Y2I6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 AL354877.1-201ENST00000424412 413 ntBASIC20.77■□□□□ 0.92
NINLQ9Y2I6 RPS2P36-201ENST00000456516 831 ntBASIC20.77■□□□□ 0.92
NINLQ9Y2I6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NINLQ9Y2I6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.77■□□□□ 0.91
NINLQ9Y2I6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.77■□□□□ 0.91
NINLQ9Y2I6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NINLQ9Y2I6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NINLQ9Y2I6 LILRP1-201ENST00000444199 1370 ntBASIC20.77■□□□□ 0.91
NINLQ9Y2I6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NINLQ9Y2I6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.76■□□□□ 0.91
NINLQ9Y2I6 TLE1P1-201ENST00000422965 589 ntBASIC20.76■□□□□ 0.91
NINLQ9Y2I6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NINLQ9Y2I6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms