Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AL049840.3-201ENST00000602669 611 ntBASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 AC105250.1-201ENST00000509378 2057 ntBASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C12orf4Q9NQ89 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 AL161645.1-201ENST00000622716 1255 ntBASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.5□□□□□ -0.25
C12orf4Q9NQ89 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 AC090616.6-203ENST00000579186 1945 ntBASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C12orf4Q9NQ89 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms