Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 TFAMP1-201ENST00000412727 736 ntBASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 MED15P5-201ENST00000423150 992 ntBASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 FAM86C2P-203ENST00000528684 1004 ntBASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 AL450472.2-201ENST00000603663 1156 ntBASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 AC008267.7-201ENST00000624570 1194 ntBASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 CICP20-201ENST00000443330 2801 ntBASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHMP1AQ9HD42 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 AL355306.1-201ENST00000415580 579 ntBASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 RN7SL589P-201ENST00000481268 310 ntBASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 IGHV3-62-201ENST00000520057 340 ntBASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 MIR4313-201ENST00000580760 101 ntBASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 AC026979.3-201ENST00000607315 403 ntBASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 AC009090.5-201ENST00000624886 2285 ntBASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 IL9RP2-201ENST00000423948 1312 ntBASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP1AQ9HD42 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms