Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 AC069224.1-201ENST00000566372 1715 ntBASIC16.67■□□□□ 0.26
HIPK3Q9H422 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 AC006335.1-201ENST00000445200 547 ntBASIC16.66■□□□□ 0.26
HIPK3Q9H422 MARK2P5-201ENST00000507649 634 ntBASIC16.66■□□□□ 0.26
HIPK3Q9H422 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 AC018635.2-201ENST00000608625 364 ntBASIC16.66■□□□□ 0.26
HIPK3Q9H422 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK3Q9H422 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK3Q9H422 AL157791.1-201ENST00000553667 1699 ntBASIC16.65■□□□□ 0.26
HIPK3Q9H422 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 MESTP3-201ENST00000503460 968 ntBASIC16.65■□□□□ 0.26
HIPK3Q9H422 IQSEC3P1-201ENST00000538799 536 ntBASIC16.65■□□□□ 0.26
HIPK3Q9H422 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 MIR3147-201ENST00000577811 66 ntBASIC16.65■□□□□ 0.26
HIPK3Q9H422 AC004466.1-201ENST00000599515 1080 ntBASIC16.65■□□□□ 0.26
HIPK3Q9H422 AL136295.7-201ENST00000619226 1200 ntBASIC16.65■□□□□ 0.26
HIPK3Q9H422 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.65■□□□□ 0.26
HIPK3Q9H422 AL645728.2-202ENST00000641679 227 ntBASIC16.65■□□□□ 0.26
HIPK3Q9H422 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK3Q9H422 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms