Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 AC127383.1-201ENST00000444697 1800 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 DRD5P1-201ENST00000456605 1438 ntBASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP3Q9BWW4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 TMEM14DP-201ENST00000422205 345 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 ACTG1P3-201ENST00000431775 1114 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 KRT43P-201ENST00000434019 910 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 AC234783.1-201ENST00000441761 496 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 PTP4A1P2-201ENST00000546033 454 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 RAB43P1-201ENST00000561790 589 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 AC009486.1-201ENST00000569860 813 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 MIR5189-201ENST00000577370 114 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 AP005117.1-202ENST00000581724 1908 ntBASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP3Q9BWW4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSBP3Q9BWW4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms