Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 DUX4L45-201ENST00000566406 1057 ntBASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 AC025181.2-201ENST00000606994 802 ntBASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 AC244669.2-201ENST00000612320 853 ntBASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 AL354718.3-201ENST00000616414 581 ntBASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 BX539320.1-201ENST00000623759 877 ntBASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 CR382287.1-201ENST00000623954 586 ntBASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 AL645728.2-202ENST00000641679 227 ntBASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRAIPQ9BWF2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.83■□□□□ 0.29
TRAIPQ9BWF2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAIPQ9BWF2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
TRAIPQ9BWF2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
TRAIPQ9BWF2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 AC006001.1-201ENST00000325130 474 ntBASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 MIR1908-201ENST00000410394 80 ntBASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 NUS1P3-201ENST00000423502 862 ntBASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 FAM21FP-201ENST00000426241 1131 ntBASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 AC022494.1-201ENST00000466044 728 ntBASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 AL138709.1-201ENST00000614840 1693 ntBASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAIPQ9BWF2 PPT1-215ENST00000641471 2368 ntBASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 FAM86MP-201ENST00000340703 885 ntBASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 AC114812.1-204ENST00000449669 728 ntBASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAIPQ9BWF2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms