Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AL023775.1-201ENST00000454907 1746 ntBASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 PTENP1-202ENST00000532280 3996 ntBASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 SPDYE17-201ENST00000412399 783 ntBASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 AC140912.1-201ENST00000577171 1054 ntBASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.83□□□□□ -0.19
TRAF4Q9BUZ4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF4Q9BUZ4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF4Q9BUZ4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF4Q9BUZ4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF4Q9BUZ4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF4Q9BUZ4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 DFFBP1-201ENST00000433250 979 ntBASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 API5-211ENST00000534695 560 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 AC104794.3-201ENST00000566840 1248 ntBASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF4Q9BUZ4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms