Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
USB1Q9BQ65 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.92□□□□□ -0.18
USB1Q9BQ65 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 RNU6-673P-201ENST00000365084 104 ntBASIC13.91□□□□□ -0.18
USB1Q9BQ65 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.91□□□□□ -0.18
USB1Q9BQ65 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 AC104596.2-201ENST00000512793 793 ntBASIC13.91□□□□□ -0.18
USB1Q9BQ65 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 API5-211ENST00000534695 560 ntTSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 RARRES2P5-201ENST00000564013 466 ntBASIC13.91□□□□□ -0.18
USB1Q9BQ65 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 AL450472.2-201ENST00000603663 1156 ntBASIC13.91□□□□□ -0.18
USB1Q9BQ65 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.91□□□□□ -0.18
USB1Q9BQ65 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 BNIP3P1-202ENST00000550043 1585 ntBASIC13.91□□□□□ -0.18
USB1Q9BQ65 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
USB1Q9BQ65 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USB1Q9BQ65 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 AC006480.2-201ENST00000609770 1337 ntBASIC13.9□□□□□ -0.18
USB1Q9BQ65 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.9□□□□□ -0.18
USB1Q9BQ65 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
USB1Q9BQ65 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.9□□□□□ -0.18
USB1Q9BQ65 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 AC011477.6-201ENST00000604980 1927 ntBASIC13.9□□□□□ -0.18
USB1Q9BQ65 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC13.9□□□□□ -0.18
USB1Q9BQ65 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.9□□□□□ -0.18
USB1Q9BQ65 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.9□□□□□ -0.18
USB1Q9BQ65 AC093726.1-201ENST00000608064 963 ntBASIC13.9□□□□□ -0.18
USB1Q9BQ65 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USB1Q9BQ65 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.9□□□□□ -0.18
USB1Q9BQ65 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms