Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK1Q99986 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK1Q99986 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK1Q99986 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK1Q99986 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK1Q99986 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VRK1Q99986 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK1Q99986 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VRK1Q99986 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK1Q99986 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK1Q99986 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VRK1Q99986 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.68□□□□□ -0.22
VRK1Q99986 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 LINC00528-201ENST00000600723 2160 ntBASIC13.68□□□□□ -0.22
VRK1Q99986 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
VRK1Q99986 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VRK1Q99986 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.68□□□□□ -0.22
VRK1Q99986 AL136982.4-201ENST00000437689 1740 ntBASIC13.68□□□□□ -0.22
VRK1Q99986 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.68□□□□□ -0.22
VRK1Q99986 TMBIM7P-203ENST00000641617 1718 ntBASIC13.68□□□□□ -0.22
VRK1Q99986 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 SPDYE19P-201ENST00000338590 713 ntBASIC13.68□□□□□ -0.22
VRK1Q99986 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK1Q99986 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
VRK1Q99986 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK1Q99986 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 SDHAP3-202ENST00000515467 728 ntBASIC13.68□□□□□ -0.22
VRK1Q99986 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK1Q99986 AP005018.1-201ENST00000525475 301 ntBASIC13.68□□□□□ -0.22
VRK1Q99986 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK1Q99986 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK1Q99986 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.68□□□□□ -0.22
VRK1Q99986 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.68□□□□□ -0.22
VRK1Q99986 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.68□□□□□ -0.22
VRK1Q99986 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK1Q99986 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK1Q99986 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK1Q99986 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VRK1Q99986 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VRK1Q99986 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK1Q99986 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 REXO1L8P-201ENST00000604378 1897 ntBASIC13.67□□□□□ -0.22
VRK1Q99986 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
VRK1Q99986 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK1Q99986 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK1Q99986 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.67□□□□□ -0.22
VRK1Q99986 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VRK1Q99986 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK1Q99986 SPDYE17-201ENST00000412399 783 ntBASIC13.67□□□□□ -0.22
VRK1Q99986 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK1Q99986 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK1Q99986 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK1Q99986 RN7SL692P-201ENST00000464677 288 ntBASIC13.67□□□□□ -0.22
VRK1Q99986 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK1Q99986 DOC2GP-202ENST00000514950 1163 ntBASIC13.67□□□□□ -0.22
VRK1Q99986 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK1Q99986 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VRK1Q99986 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.67□□□□□ -0.22
VRK1Q99986 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK1Q99986 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.67□□□□□ -0.22
VRK1Q99986 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 AC025048.6-201ENST00000634326 1161 ntBASIC13.67□□□□□ -0.22
VRK1Q99986 AL109936.8-201ENST00000641772 604 ntBASIC13.67□□□□□ -0.22
VRK1Q99986 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK1Q99986 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
VRK1Q99986 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK1Q99986 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK1Q99986 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms