Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 AC006486.2-201ENST00000624246 2199 ntBASIC16.04■□□□□ 0.16
SMOQ99835 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SMOQ99835 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.04■□□□□ 0.16
SMOQ99835 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SMOQ99835 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SMOQ99835 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 AC055811.4-201ENST00000624039 1754 ntBASIC16.03■□□□□ 0.16
SMOQ99835 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.03■□□□□ 0.16
SMOQ99835 WASH3P-207ENST00000560956 1394 ntBASIC16.03■□□□□ 0.16
SMOQ99835 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
SMOQ99835 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.03■□□□□ 0.16
SMOQ99835 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.03■□□□□ 0.16
SMOQ99835 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.03■□□□□ 0.16
SMOQ99835 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.03■□□□□ 0.16
SMOQ99835 AC004466.1-201ENST00000599515 1080 ntBASIC16.03■□□□□ 0.16
SMOQ99835 AC133552.6-201ENST00000613406 534 ntBASIC16.03■□□□□ 0.16
SMOQ99835 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 AC126177.1-201ENST00000547829 2218 ntBASIC16.03■□□□□ 0.16
SMOQ99835 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SMOQ99835 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.03■□□□□ 0.16
SMOQ99835 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMOQ99835 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SMOQ99835 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.02■□□□□ 0.16
SMOQ99835 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.02■□□□□ 0.16
SMOQ99835 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.02■□□□□ 0.16
SMOQ99835 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
SMOQ99835 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.02■□□□□ 0.16
SMOQ99835 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
SMOQ99835 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.02■□□□□ 0.16
SMOQ99835 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.02■□□□□ 0.16
SMOQ99835 AC099336.1-201ENST00000417053 1171 ntBASIC16.02■□□□□ 0.16
SMOQ99835 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.02■□□□□ 0.16
SMOQ99835 AC026954.1-201ENST00000429771 1293 ntBASIC16.02■□□□□ 0.16
SMOQ99835 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SMOQ99835 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.02■□□□□ 0.16
SMOQ99835 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 AC026434.2-201ENST00000506094 1078 ntBASIC16.02■□□□□ 0.16
SMOQ99835 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SMOQ99835 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SMOQ99835 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.02■□□□□ 0.16
SMOQ99835 RN7SL48P-201ENST00000579283 293 ntBASIC16.02■□□□□ 0.16
SMOQ99835 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.02■□□□□ 0.16
SMOQ99835 ECM1P1-201ENST00000604092 1279 ntBASIC16.02■□□□□ 0.16
SMOQ99835 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SMOQ99835 RHOXF1P1-202ENST00000635473 501 ntBASIC16.02■□□□□ 0.16
SMOQ99835 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMOQ99835 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms