Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 CYP46A4P-201ENST00000414953 267 ntBASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 NUP210P1-202ENST00000504322 710 ntBASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 AC116345.2-201ENST00000512837 523 ntBASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 CYP4F23P-201ENST00000593402 1579 ntBASIC17.68■□□□□ 0.42
CDK5RAP2Q96SN8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 AC125604.1-201ENST00000496255 707 ntBASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 AC027237.1-201ENST00000560942 655 ntBASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 AL162426.1-201ENST00000624141 743 ntBASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 AC006486.2-201ENST00000624246 2199 ntBASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 AC103988.2-201ENST00000561804 725 ntBASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDK5RAP2Q96SN8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 PAUPAR-201ENST00000630360 2965 ntBASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AC132872.4-202ENST00000622924 2756 ntBASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AC018629.1-201ENST00000623381 1736 ntBASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms