Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB3IPQ96QF0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAB3IPQ96QF0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB3IPQ96QF0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB3IPQ96QF0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB3IPQ96QF0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 IER3-202ENST00000376377 1350 ntBASIC15.07■□□□□ 0
RAB3IPQ96QF0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB3IPQ96QF0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RAB3IPQ96QF0 CICP11-201ENST00000434745 2827 ntBASIC15.07■□□□□ 0
RAB3IPQ96QF0 BNIP3P1-202ENST00000550043 1585 ntBASIC15.07■□□□□ 0
RAB3IPQ96QF0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AL121672.3-201ENST00000608644 468 ntBASIC15.06■□□□□ 0
RAB3IPQ96QF0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.06■□□□□ 0
RAB3IPQ96QF0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IPQ96QF0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IPQ96QF0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.05■□□□□ 0
RAB3IPQ96QF0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB3IPQ96QF0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IPQ96QF0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.05■□□□□ 0
RAB3IPQ96QF0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RAB3IPQ96QF0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
RAB3IPQ96QF0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.05■□□□□ 0
RAB3IPQ96QF0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.05■□□□□ 0
RAB3IPQ96QF0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
RAB3IPQ96QF0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB3IPQ96QF0 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IPQ96QF0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 CHCHD2P8-201ENST00000429873 447 ntBASIC15.05■□□□□ -0
RAB3IPQ96QF0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 BX276092.5-203ENST00000456199 560 ntBASIC15.05■□□□□ -0
RAB3IPQ96QF0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AC004706.3-202ENST00000621574 984 ntBASIC15.05■□□□□ -0
RAB3IPQ96QF0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AP000550.4-202ENST00000639755 178 ntBASIC15.05■□□□□ -0
RAB3IPQ96QF0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms