Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 SPDYE14P-201ENST00000442619 822 ntBASIC11.58□□□□□ -0.56
LINC00477Q96M19 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 MIR4453-201ENST00000584019 89 ntBASIC11.58□□□□□ -0.56
LINC00477Q96M19 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 AP001059.3-201ENST00000619053 235 ntBASIC11.58□□□□□ -0.56
LINC00477Q96M19 AC009093.7-201ENST00000623853 1223 ntBASIC11.58□□□□□ -0.56
LINC00477Q96M19 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00477Q96M19 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00477Q96M19 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AC126335.2-201ENST00000623362 4637 ntBASIC11.57□□□□□ -0.56
LINC00477Q96M19 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 GPS2P2-201ENST00000430745 888 ntBASIC11.57□□□□□ -0.56
LINC00477Q96M19 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AC093520.2-201ENST00000561830 333 ntBASIC11.57□□□□□ -0.56
LINC00477Q96M19 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 MIR6080-201ENST00000617359 66 ntBASIC11.57□□□□□ -0.56
LINC00477Q96M19 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AL033527.5-202ENST00000641632 1098 ntBASIC11.57□□□□□ -0.56
LINC00477Q96M19 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LINC00477Q96M19 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00477Q96M19 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms