Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 HLA-K-203ENST00000430151 1046 ntBASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 GNAQP1-201ENST00000444815 1067 ntBASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 VDAC1P7-201ENST00000462417 847 ntBASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 AC232323.1-201ENST00000540724 2099 ntBASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 AL391825.1-201ENST00000457671 1364 ntBASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 AL442647.2-201ENST00000429864 857 ntBASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 DFFBP1-201ENST00000433250 979 ntBASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM5Q96HC4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AC018442.1-201ENST00000421439 2061 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AC134915.1-201ENST00000426461 574 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 UGT1A2P-201ENST00000454886 866 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms