Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 AC104794.3-201ENST00000566840 1248 ntBASIC15.92■□□□□ 0.14
IFT43Q96FT9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
IFT43Q96FT9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFT43Q96FT9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AC044860.1-202ENST00000559481 777 ntBASIC15.91■□□□□ 0.14
IFT43Q96FT9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AC090616.6-203ENST00000579186 1945 ntBASIC15.91■□□□□ 0.14
IFT43Q96FT9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 MYO15B-237ENST00000642007 4893 ntBASIC15.91■□□□□ 0.14
IFT43Q96FT9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 AC106881.1-201ENST00000605849 3329 ntBASIC15.91■□□□□ 0.14
IFT43Q96FT9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
IFT43Q96FT9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFT43Q96FT9 SSR4P1-203ENST00000599569 2260 ntBASIC15.91■□□□□ 0.14
IFT43Q96FT9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AC007191.1-201ENST00000623179 2995 ntBASIC15.9■□□□□ 0.14
IFT43Q96FT9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AC136621.1-201ENST00000624017 2304 ntBASIC15.9■□□□□ 0.14
IFT43Q96FT9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms