Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 C1QBPP1-201ENST00000400117 770 ntBASIC14.91□□□□□ -0.02
RNF31Q96EP0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 AC134915.1-201ENST00000426461 574 ntBASIC14.91□□□□□ -0.02
RNF31Q96EP0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 AC106760.1-201ENST00000508690 800 ntBASIC14.91□□□□□ -0.02
RNF31Q96EP0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 AC244669.2-201ENST00000612320 853 ntBASIC14.91□□□□□ -0.02
RNF31Q96EP0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.91□□□□□ -0.02
RNF31Q96EP0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF31Q96EP0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
RNF31Q96EP0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 FAM86MP-201ENST00000340703 885 ntBASIC14.9□□□□□ -0.02
RNF31Q96EP0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 AC092658.1-201ENST00000505836 891 ntBASIC14.9□□□□□ -0.02
RNF31Q96EP0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 AC124283.3-201ENST00000570869 594 ntBASIC14.9□□□□□ -0.02
RNF31Q96EP0 BRI3BPP1-201ENST00000594224 787 ntBASIC14.9□□□□□ -0.02
RNF31Q96EP0 AC233724.13-201ENST00000598383 410 ntBASIC14.9□□□□□ -0.02
RNF31Q96EP0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 GPR182-203ENST00000622922 591 ntBASIC14.9□□□□□ -0.02
RNF31Q96EP0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF31Q96EP0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF31Q96EP0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RNF31Q96EP0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF31Q96EP0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms