Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 FAM86LP-201ENST00000478302 853 ntBASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AC133539.2-201ENST00000604757 467 ntBASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AL033527.5-201ENST00000641382 801 ntBASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 SBF1P1-201ENST00000444527 5631 ntBASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 AC092127.1-201ENST00000567093 3455 ntBASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3KBP1Q96B97 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 AC022532.1-201ENST00000624563 1728 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 LINC02228-204ENST00000642115 2962 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 AC098850.1-201ENST00000419919 790 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 AC007389.4-201ENST00000454674 793 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 GPR53P-205ENST00000457298 1084 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 AC097359.3-201ENST00000603982 1210 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 WFDC1-204ENST00000613603 549 ntBASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SH3KBP1Q96B97 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms